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Ninoy Aquino International Airport to El Nido Airport flight

Explore the cheapest one-way and round-trip flights from Ninoy Aquino International Airport to El Nido Airport over the next 90 days, with one-way fares from JPY 18,740 and round-trip from JPY 38,200. Based on Trip.com's latest 7-day flight data.

    • Cheapest
      MNL 23:15
      6h 45m
      1 stop
      ENI 06:00
      Manila - El Nido | Tue, Dec 8 | Cebu Pacific
      JPY 18,740 JPY 31,210
      40% off
      40% off
      JPY 31,210 JPY 18,740
    • Cheapest
      MNL 22:45
      7h 15m
      1 stop
      ENI 06:00
      Manila - El Nido | Mon, Dec 7 | Cebu Pacific
      JPY 18,740 JPY 31,210
      40% off
      40% off
      JPY 31,210 JPY 18,740
    • MNL 20:35
      9h 25m
      1 stop
      ENI 06:00
      Manila - El Nido | Wed, Nov 18 | Philippines AirAsia
      JPY 19,520 JPY 31,210
      37% off
      37% off
      JPY 31,210 JPY 19,520
    • MNL 04:25
      25h 35m
      1 stop
      ENI 06:00
      Manila - El Nido | Tue, Dec 8 | Philippines AirAsia
      JPY 19,710
      37% off
      JPY 31,210 JPY 19,710
    • MNL 04:25
      25h 35m
      1 stop
      ENI 06:00
      Manila - El Nido | Mon, Dec 7 | Philippines AirAsia
      JPY 20,110
      36% off
      JPY 31,210 JPY 20,110
    • MNL 23:40
      6h 20m
      1 stop
      ENI 06:00
      Manila - El Nido | Sat, Nov 7 | Cebu Pacific
      JPY 20,600
      34% off
      JPY 31,210 JPY 20,600
    • MNL 23:10
      6h 50m
      1 stop
      ENI 06:00
      Manila - El Nido | Wed, Nov 18 | Philippine Airlines
      JPY 20,820
      33% off
      JPY 31,210 JPY 20,820
    • MNL 13:40
      16h 20m
      1 stop
      ENI 06:00
      Manila - El Nido | Tue, Dec 8 | Philippine Airlines
      JPY 21,100
      32% off
      JPY 31,210 JPY 21,100
    • MNL 20:35
      9h 25m
      1 stop
      ENI 06:00
      Manila - El Nido | Sat, Nov 7 | Philippines AirAsia
      JPY 21,950
      30% off
      JPY 31,210 JPY 21,950
    • MNL 13:00
      17h 25m
      1 stop
      ENI 14:00
      Manila - El Nido | Sun, Nov 1 | Normal Airline
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    • MNL 23:45
      6h 15m
      1 stop
      ENI 06:00
      Manila - El Nido | Fri, Nov 20 | Cebu Pacific
      ENI 08:25
      16h 5m
      1 stop
      MNL 00:30
      El Nido - Manila | Mon, Nov 23 | Cebgo
      JPY 38,200 JPY 65,240
      41% off
      41% off
      JPY 65,240 JPY 38,200
    • MNL 23:45
      6h 15m
      1 stop
      ENI 06:00
      Manila - El Nido | Fri, Nov 6 | Cebu Pacific
      ENI 08:25
      16h 55m
      1 stop
      MNL 01:20
      El Nido - Manila | Wed, Nov 11 | Cebgo
      JPY 38,390 JPY 65,240
      41% off
      41% off
      JPY 65,240 JPY 38,390
    • MNL 23:40
      6h 20m
      1 stop
      ENI 06:00
      Manila - El Nido | Sun, Nov 8 | Cebu Pacific
      ENI 05:50
      15h 35m
      1 stop
      MNL 21:25
      El Nido - Manila | Sat, Nov 14 | Cebgo
      JPY 38,960 JPY 65,240
      40% off
      40% off
      JPY 65,240 JPY 38,960
    • MNL 20:45
      9h 15m
      1 stop
      ENI 06:00
      Manila - El Nido | Wed, Nov 18 | Cebu Pacific
      ENI 05:50
      3h 50m
      1 stop
      MNL 09:40
      El Nido - Manila | Tue, Nov 24 | Cebgo
      JPY 41,010
      37% off
      JPY 65,240 JPY 41,010
    • MNL 04:25
      25h 35m
      1 stop
      ENI 06:00
      Manila - El Nido | Wed, Nov 4 | Philippines AirAsia
      ENI 13:35
      8h 35m
      1 stop
      MNL 22:10
      El Nido - Manila | Fri, Nov 6 | Cebgo
      JPY 42,010
      36% off
      JPY 65,240 JPY 42,010
    • MNL 04:50
      25h 10m
      1 stop
      ENI 06:00
      Manila - El Nido | Wed, Nov 4 | Cebu Pacific
      ENI 13:35
      8h 35m
      1 stop
      MNL 22:10
      El Nido - Manila | Fri, Nov 6 | Cebgo
      JPY 42,430
      35% off
      JPY 65,240 JPY 42,430
    • MNL 04:25
      25h 35m
      1 stop
      ENI 06:00
      Manila - El Nido | Wed, Nov 11 | Philippines AirAsia
      ENI 05:50
      18h 5m
      1 stop
      MNL 23:55
      El Nido - Manila | Tue, Nov 17 | Cebgo
      JPY 42,910
      34% off
      JPY 65,240 JPY 42,910
    • MNL 20:45
      9h 15m
      1 stop
      ENI 06:00
      Manila - El Nido | Sun, Nov 1 | Cebu Pacific
      ENI 13:35
      8h 35m
      1 stop
      MNL 22:10
      El Nido - Manila | Fri, Nov 6 | Cebgo
      JPY 45,100
      31% off
      JPY 65,240 JPY 45,100
    • MNL 00:00
      6h
      1 stop
      ENI 06:00
      Manila - El Nido | Mon, Nov 2 | Cebu Pacific
      ENI 16:40
      9h 40m
      1 stop
      MNL 02:20
      El Nido - Manila | Mon, Nov 9 | Cebgo
      JPY 45,290
      31% off
      JPY 65,240 JPY 45,290
    • MNL 13:00
      17h 25m
      1 stop
      ENI 14:00
      Manila - El Nido | Sun, Nov 1 | Normal Airline
      ENI 15:00
      6h
      Direct
      MNL 16:00
      El Nido - Manila | Tue, Nov 3 | Normal Airline
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    • MNL 13:00
      4h 20m
      1 stop
      ENI 17:20
      Manila - El Nido | Tue, Nov 17 | Philippine Airlines
      JPY 23,020 JPY 77,030
      70% off
      70% off
      JPY 77,030 JPY 23,020
    • MNL 13:00
      4h 20m
      1 stop
      ENI 17:20
      Manila - El Nido | Tue, Nov 24 | Philippine Airlines
      JPY 23,540 JPY 77,030
      69% off
      69% off
      JPY 77,030 JPY 23,540
    • MNL 04:25
      5h 30m
      1 stop
      ENI 09:55
      Manila - El Nido | Tue, Nov 17 | Philippines AirAsia
      JPY 24,060 JPY 77,030
      69% off
      69% off
      JPY 77,030 JPY 24,060
    • MNL 15:50
      4h 45m
      1 stop
      ENI 20:35
      Manila - El Nido | Fri, Nov 13 | Cebu Pacific
      JPY 25,220
      67% off
      JPY 77,030 JPY 25,220
    • MNL 13:00
      4h 20m
      1 stop
      ENI 17:20
      Manila - El Nido | Thu, Nov 12 | Philippine Airlines
      JPY 25,550
      67% off
      JPY 77,030 JPY 25,550
    • MNL 13:30
      3h 50m
      1 stop
      ENI 17:20
      Manila - El Nido | Sat, Nov 28 | Cebu Pacific
      JPY 25,570
      67% off
      JPY 77,030 JPY 25,570
    • MNL 00:00
      6h
      1 stop
      ENI 06:00
      Manila - El Nido | Mon, Nov 2 | Cebu Pacific
      JPY 25,950
      66% off
      JPY 77,030 JPY 25,950
    • MNL 04:50
      5h 5m
      1 stop
      ENI 09:55
      Manila - El Nido | Thu, Nov 5 | Cebu Pacific
      JPY 26,820
      65% off
      JPY 77,030 JPY 26,820
    • MNL 13:30
      3h 50m
      1 stop
      ENI 17:20
      Manila - El Nido | Tue, Nov 3 | Cebu Pacific
      JPY 36,830
      52% off
      JPY 77,030 JPY 36,830
    • MNL 13:00
      17h 25m
      1 stop
      ENI 14:00
      Manila - El Nido | Sun, Nov 1 | Normal Airline
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    • MNL 00:00
      6h
      1 stop
      ENI 06:00
      Manila - El Nido | Mon, Nov 2 | Cebu Pacific
      JPY 25,950 JPY 70,310
      63% off
      63% off
      JPY 70,310 JPY 25,950
    • MNL 04:50
      5h 5m
      1 stop
      ENI 09:55
      Manila - El Nido | Thu, Nov 5 | Cebu Pacific
      JPY 26,820 JPY 70,310
      62% off
      62% off
      JPY 70,310 JPY 26,820
    • MNL 04:50
      5h 5m
      1 stop
      ENI 09:55
      Manila - El Nido | Sun, Nov 1 | Cebu Pacific
      JPY 28,760 JPY 70,310
      59% off
      59% off
      JPY 70,310 JPY 28,760
    • MNL 12:10
      4h 30m
      1 stop
      ENI 16:40
      Manila - El Nido | Fri, Nov 6 | Cebu Pacific
      JPY 34,110
      51% off
      JPY 70,310 JPY 34,110
    • MNL 13:30
      3h 50m
      1 stop
      ENI 17:20
      Manila - El Nido | Tue, Nov 3 | Cebu Pacific
      JPY 36,830
      48% off
      JPY 70,310 JPY 36,830
    • MNL 12:10
      4h 30m
      1 stop
      ENI 16:40
      Manila - El Nido | Wed, Nov 4 | Cebu Pacific
      JPY 50,620
      28% off
      JPY 70,310 JPY 50,620
    • MNL 13:00
      17h 25m
      1 stop
      ENI 14:00
      Manila - El Nido | Sun, Nov 1 | Normal Airline
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    • MNL 13:00
      4h 20m
      1 stop
      ENI 17:20
      Manila - El Nido | Thu, Dec 3 | Philippine Airlines
      JPY 32,930 JPY 87,910
      63% off
      63% off
      JPY 87,910 JPY 32,930
    • MNL 13:00
      4h 20m
      1 stop
      ENI 17:20
      Manila - El Nido | Sat, Nov 28 | Philippine Airlines
      JPY 33,040 JPY 87,910
      62% off
      62% off
      JPY 87,910 JPY 33,040
    • MNL 13:00
      4h 20m
      1 stop
      ENI 17:20
      Manila - El Nido | Sat, Oct 31 | Philippine Airlines
      JPY 36,190 JPY 87,910
      59% off
      59% off
      JPY 87,910 JPY 36,190
    • MNL 13:00
      4h 20m
      1 stop
      ENI 17:20
      Manila - El Nido | Thu, Dec 17 | Philippine Airlines
      JPY 40,090
      54% off
      JPY 87,910 JPY 40,090
    • MNL 13:00
      4h 20m
      1 stop
      ENI 17:20
      Manila - El Nido | Thu, Dec 24 | Philippine Airlines
      JPY 42,620
      52% off
      JPY 87,910 JPY 42,620
    • MNL 13:00
      4h 20m
      1 stop
      ENI 17:20
      Manila - El Nido | Thu, Nov 26 | Philippine Airlines
      JPY 44,920
      49% off
      JPY 87,910 JPY 44,920
    • MNL 11:40
      5h
      1 stop
      ENI 16:40
      Manila - El Nido | Fri, Nov 6 | Philippine Airlines
      JPY 38,480
      56% off
      JPY 87,910 JPY 38,480
    • MNL 11:40
      5h
      1 stop
      ENI 16:40
      Manila - El Nido | Thu, Nov 12 | Philippine Airlines
      JPY 40,350
      54% off
      JPY 87,910 JPY 40,350
    • MNL 11:40
      5h
      1 stop
      ENI 16:40
      Manila - El Nido | Fri, Nov 27 | Philippine Airlines
      JPY 45,700
      48% off
      JPY 87,910 JPY 45,700
    • MNL 13:00
      17h 25m
      1 stop
      ENI 14:00
      Manila - El Nido | Sun, Nov 1 | Normal Airline
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Displayed flight fares from Manila to El Nido are based on average prices across airlines for the next 3 months, according to the latest Trip.com database.

Trip.com Price Insights: Flights from Ninoy Aquino International Airport to El Nido Airport

What is the cheapest month to fly from Ninoy Aquino International Airport to El Nido Airport?

The data is based on the past 12 months and shows the average one-way ticket prices from Ninoy Aquino International Airport to El Nido Airport for each month in the Trip.com database.

Based on Trip.com's data from the past 12 months, the cheapest one-way flights from Ninoy Aquino International Airport to El Nido Airport are usually in January, with an average price of JPY 22,560. It is best to avoid August, when the average price can reach JPY 33,610.

JPY 33,610
JPY 28,085
JPY 22,560
JPY 17,035
    Cheapest
  • JPY 23,180
    Oct
  • JPY 25,840
    Nov
  • JPY 27,140
    Dec
  • JPY 22,560
    Jan
  • JPY 26,290
    Feb
  • JPY 24,800
    Mar
  • JPY 27,330
    Apr
  • JPY 31,270
    May
  • JPY 33,370
    Jun
  • JPY 31,490
    Jul
  • JPY 33,610
    Aug
  • JPY 28,440
    Sep

What is the cheapest month to fly return from Ninoy Aquino International Airport to El Nido Airport?

The data is based on the past 12 months and shows the average monthly return fares from Ninoy Aquino International Airport to El Nido Airport in the Trip.com database.

Based on Trip.com's data from the past 12 months, April is often the month to find the lowest fares from Ninoy Aquino International Airport to El Nido Airport, with an average price of JPY 36,220. July is usually the most expensive month, with an average price reaching JPY 79,390.

JPY 79,390
JPY 57,805
JPY 36,220
JPY 14,635
    Cheapest
  • JPY 47,820
    Oct
  • JPY 51,720
    Nov
  • JPY 55,410
    Dec
  • JPY 45,890
    Jan
  • JPY 52,860
    Feb
  • JPY 54,190
    Mar
  • JPY 36,220
    Apr
  • JPY 43,440
    May
  • JPY 62,800
    Jun
  • JPY 79,390
    Jul
  • JPY 65,870
    Aug
  • JPY 42,160
    Sep

What is the cheapest day of the week to fly from Ninoy Aquino International Airport to El Nido Airport?

The data is based on the past 12 months and shows the average ticket prices from Ninoy Aquino International Airport to El Nido Airport for each day of the week in the Trip.com database.

Based on Trip.com's data from the past 12 months, the cheapest departure day from Ninoy Aquino International Airport to El Nido Airport is Thursday, with average prices usually lower than other days. Avoid departing on Saturday as prices are typically highest on that day.

JPY 28,980
JPY 28,160
JPY 27,340
JPY 26,520
    Cheapest
  • JPY 28,520
    Mon
  • JPY 28,730
    Tue
  • JPY 28,520
    Wed
  • JPY 27,340
    Thu
  • JPY 27,600
    Fri
  • JPY 28,980
    Sat
  • JPY 27,790
    Sun

Which airline offers the cheapest flights from Ninoy Aquino International Airport to El Nido Airport?

The cheapest airline flying from Ninoy Aquino International Airport to El Nido Airport is Cebu Pacific (from JPY 18,740) among 5 carriers operating this route. Based on Trip.com's latest 7-day flight data.

Cebu Pacific
From JPY 18,740
Philippines AirAsia
From JPY 19,520
Philippine Airlines
From JPY 20,820
Thai Airways
From JPY 101,560
Bangkok Airways
From JPY 124,260

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What is the flight schedule from Ninoy Aquino International Airport to El Nido Airport?

Check the schedule for flights from Manila to El Nido and find the flight that best matches your travel plans.

Flight info.
Departure
Arrival
Weekly Schedule

  1. 5J575

    Ninoy Aquino International Airport

    23:45

    MNL

    1h 35m

    Direct

    01:20

    CEB

    - - - - T F S
    Search

  2. DG6256

    Mactan-Cebu International Airport

    04:10

    CEB

    1h 50m

    Direct

    06:00

    ENI

    S M T W T F S

  3. 5J583

    Ninoy Aquino International Airport

    23:15

    MNL

    1h 35m

    Direct

    00:50

    CEB

    S M T W T - S
    Search

  4. DG6256

    Mactan-Cebu International Airport

    04:10

    CEB

    1h 50m

    Direct

    06:00

    ENI

    S M T W T F S

  5. PR2869

    Ninoy Aquino International Airport

    22:25

    MNL

    1h 25m

    Direct

    23:50

    CEB

    S M T W T F S
    Search

  6. DG6256

    Mactan-Cebu International Airport

    04:10

    CEB

    1h 50m

    Direct

    06:00

    ENI

    S M T W T F S

  7. 5J2509

    Ninoy Aquino International Airport

    22:45

    MNL

    1h 35m

    Direct

    00:20

    CEB

    S - - - - - -
    Search

  8. DG6256

    Mactan-Cebu International Airport

    04:10

    CEB

    1h 50m

    Direct

    06:00

    ENI

    S M T W T F S

  9. Z28777

    Ninoy Aquino International Airport

    22:30

    MNL

    1h 30m

    Direct

    00:00

    CEB

    S - T - T - S
    Search

  10. DG6256

    Mactan-Cebu International Airport

    04:10

    CEB

    1h 50m

    Direct

    06:00

    ENI

    S M T W T F S

  11. PR2857

    Ninoy Aquino International Airport

    22:00

    MNL

    1h 25m

    Direct

    23:25

    CEB

    S M T W T F S
    Search

  12. DG6256

    Mactan-Cebu International Airport

    04:10

    CEB

    1h 50m

    Direct

    06:00

    ENI

    S M T W T F S

  13. 5J2503

    Ninoy Aquino International Airport

    21:55

    MNL

    1h 35m

    Direct

    23:30

    CEB

    S M T W T F S
    Search

  14. DG6256

    Mactan-Cebu International Airport

    04:10

    CEB

    1h 50m

    Direct

    06:00

    ENI

    S M T W T F S

  15. PR2863

    Ninoy Aquino International Airport

    21:40

    MNL

    1h 25m

    Direct

    23:05

    CEB

    S M T W T F S
    Search

  16. DG6256

    Mactan-Cebu International Airport

    04:10

    CEB

    1h 50m

    Direct

    06:00

    ENI

    S M T W T F S

  17. 5J559

    Ninoy Aquino International Airport

    20:45

    MNL

    1h 35m

    Direct

    22:20

    CEB

    - - T - T F S
    Search

  18. DG6256

    Mactan-Cebu International Airport

    04:10

    CEB

    1h 50m

    Direct

    06:00

    ENI

    S M T W T F S

  19. Z2777

    Ninoy Aquino International Airport

    17:45

    MNL

    1h 25m

    Direct

    19:10

    CEB

    - M - W - F -
    Search

  20. DG6256

    Mactan-Cebu International Airport

    04:10

    CEB

    1h 50m

    Direct

    06:00

    ENI

    S M T W T F S
Find more flights and airlines

About Ninoy Aquino International Airport and El Nido Airport

Learn about Ninoy Aquino International Airport (MNL) and El Nido Airport (ENI) — including location, terminals, transportation, and travel tips.

Flight distance 407.32km
Cheapest one-way ticket price JPY 18,740
Cheapest return ticket price JPY 38,200

FAQs for Ninoy Aquino International Airport to El Nido Airport Flights

  • How many daily flights are there from Ninoy Aquino International Airport (MNL) to El Nido Airport (ENI)?

    There are around 2 daily flights from Ninoy Aquino International Airport (MNL) to El Nido Airport (ENI).
  • The route from Ninoy Aquino International Airport (MNL) to El Nido Airport (ENI) is quite popular. Without considering departure times or holidays, tickets cost around JPY 38,910 in March, the most expensive month to book this route.
    • The distance from El Nido Airport to downtown is about 5km, by taxi about 20 minutes.
  • AirSWIFT AirLine is a very popular airline operating an average of 6624 flights per month.
  • One-way flights from Ninoy Aquino International Airport to El Nido Airport currently start from JPY 18,740, and round-trip fares start from JPY 38,200. The current lowest fare is a Cebu Pacific flight departing on Tue, Dec 8; prices may vary depending on availability.
  • Based on Trip.com flight data for departures within the next 30 days with at most one stop, the average one-way price from Ninoy Aquino International Airport to El Nido Airport is JPY 28,470. Prices may vary depending on the departure date, airline, and availability.
  • AirSWIFT AirLine are the most popular budget airlines flying from Ninoy Aquino International Airport to El Nido Airport, with one-way fares starting from JPY 18,740. Compare final prices carefully, as baggage, seat selection and payment fees may apply.
  • Enter Ninoy Aquino International Airport and El Nido Airport, select your departure date and number of passengers, then compare flights by price, flight duration, and baggage allowance. Once you've chosen a fare, review the change and refund rules, fill in passenger details, and pay to receive your booking confirmation.

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