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Ninoy Aquino International Airport to El Nido Airport flight

Explore the cheapest one-way and round-trip flights from Ninoy Aquino International Airport to El Nido Airport over the next 90 days, with one-way fares from HK$986 and round-trip from HK$1,906. Based on Trip.com's latest 7-day flight data.

    • Cheapest
      MNL 23:15
      6h 45m
      1 stop
      ENI 06:00
      Manila - El Nido | Fri, Nov 20 | Cebu Pacific
      HK$986 HK$1,610
      39% off
      39% off
      HK$1,610 HK$986
    • MNL 04:25
      25h 35m
      1 stop
      ENI 06:00
      Manila - El Nido | Fri, Nov 20 | Philippines AirAsia
      HK$1,002 HK$1,610
      38% off
      38% off
      HK$1,610 HK$1,002
    • MNL 20:35
      9h 25m
      1 stop
      ENI 06:00
      Manila - El Nido | Tue, Dec 8 | Philippines AirAsia
      HK$1,005 HK$1,610
      38% off
      38% off
      HK$1,610 HK$1,005
    • MNL 22:30
      7h 30m
      1 stop
      ENI 06:00
      Manila - El Nido | Sun, Dec 6 | Philippines AirAsia
      HK$1,018
      37% off
      HK$1,610 HK$1,018
    • MNL 23:10
      6h 50m
      1 stop
      ENI 06:00
      Manila - El Nido | Sun, Dec 6 | Philippine Airlines
      HK$1,053
      35% off
      HK$1,610 HK$1,053
    • MNL 23:10
      6h 50m
      1 stop
      ENI 06:00
      Manila - El Nido | Tue, Dec 8 | Philippine Airlines
      HK$1,066
      34% off
      HK$1,610 HK$1,066
    • MNL 23:15
      21h 20m
      1 stop
      ENI 20:35
      Manila - El Nido | Thu, Dec 10 | Cebu Pacific
      HK$1,074
      33% off
      HK$1,610 HK$1,074
    • MNL 22:50
      7h 10m
      1 stop
      ENI 06:00
      Manila - El Nido | Wed, Dec 9 | Cebu Pacific
      HK$1,111
      31% off
      HK$1,610 HK$1,111
    • MNL 05:00
      25h
      1 stop
      ENI 06:00
      Manila - El Nido | Fri, Nov 20 | Philippine Airlines
      HK$1,118
      31% off
      HK$1,610 HK$1,118
    • MNL 13:00
      17h 25m
      1 stop
      ENI 14:00
      Manila - El Nido | Thu, Nov 5 | Normal Airline
      Find more flights
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    • MNL 23:45
      6h 15m
      1 stop
      ENI 06:00
      Manila - El Nido | Fri, Nov 20 | Cebu Pacific
      ENI 08:25
      16h 5m
      1 stop
      MNL 00:30
      El Nido - Manila | Mon, Nov 23 | Cebgo
      HK$1,906 HK$3,302
      42% off
      42% off
      HK$3,302 HK$1,906
    • MNL 23:45
      6h 15m
      1 stop
      ENI 06:00
      Manila - El Nido | Fri, Nov 6 | Cebu Pacific
      ENI 08:25
      16h 55m
      1 stop
      MNL 01:20
      El Nido - Manila | Wed, Nov 11 | Cebgo
      HK$1,916 HK$3,302
      42% off
      42% off
      HK$3,302 HK$1,916
    • MNL 23:40
      6h 20m
      1 stop
      ENI 06:00
      Manila - El Nido | Sun, Nov 8 | Cebu Pacific
      ENI 05:50
      15h 35m
      1 stop
      MNL 21:25
      El Nido - Manila | Sat, Nov 14 | Cebgo
      HK$1,944 HK$3,302
      41% off
      41% off
      HK$3,302 HK$1,944
    • MNL 20:45
      9h 15m
      1 stop
      ENI 06:00
      Manila - El Nido | Wed, Nov 18 | Cebu Pacific
      ENI 05:50
      3h 50m
      1 stop
      MNL 09:40
      El Nido - Manila | Tue, Nov 24 | Cebgo
      HK$2,047
      38% off
      HK$3,302 HK$2,047
    • MNL 23:15
      6h 45m
      1 stop
      ENI 06:00
      Manila - El Nido | Tue, Dec 8 | Cebu Pacific
      ENI 05:50
      8h
      1 stop
      MNL 13:50
      El Nido - Manila | Sun, Dec 13 | Cebgo
      HK$2,060
      38% off
      HK$3,302 HK$2,060
    • MNL 04:25
      25h 35m
      1 stop
      ENI 06:00
      Manila - El Nido | Wed, Nov 11 | Philippines AirAsia
      ENI 05:50
      18h 5m
      1 stop
      MNL 23:55
      El Nido - Manila | Tue, Nov 17 | Cebgo
      HK$2,141
      35% off
      HK$3,302 HK$2,141
    • MNL 20:35
      9h 25m
      1 stop
      ENI 06:00
      Manila - El Nido | Wed, Nov 4 | Cebu Pacific
      ENI 16:40
      9h 40m
      1 stop
      MNL 02:20
      El Nido - Manila | Tue, Nov 10 | Cebgo
      HK$2,158
      35% off
      HK$3,302 HK$2,158
    • MNL 23:15
      6h 45m
      1 stop
      ENI 06:00
      Manila - El Nido | Wed, Dec 9 | Cebu Pacific
      ENI 05:50
      3h 50m
      1 stop
      MNL 09:40
      El Nido - Manila | Tue, Dec 15 | Cebgo
      HK$2,284
      31% off
      HK$3,302 HK$2,284
    • MNL 04:25
      25h 35m
      1 stop
      ENI 06:00
      Manila - El Nido | Wed, Dec 9 | Philippines AirAsia
      ENI 06:20
      19h 45m
      1 stop
      MNL 02:05
      El Nido - Manila | Fri, Dec 11 | Cebgo
      HK$2,297
      30% off
      HK$3,302 HK$2,297
    • MNL 13:00
      17h 25m
      1 stop
      ENI 14:00
      Manila - El Nido | Thu, Nov 5 | Normal Airline
      ENI 15:00
      6h
      Direct
      MNL 16:00
      El Nido - Manila | Sat, Nov 7 | Normal Airline
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    • MNL 13:00
      4h 20m
      1 stop
      ENI 17:20
      Manila - El Nido | Tue, Nov 17 | Philippine Airlines
      HK$1,149 HK$4,165
      72% off
      72% off
      HK$4,165 HK$1,149
    • MNL 13:00
      4h 20m
      1 stop
      ENI 17:20
      Manila - El Nido | Tue, Nov 24 | Philippine Airlines
      HK$1,175 HK$4,165
      72% off
      72% off
      HK$4,165 HK$1,175
    • MNL 04:25
      5h 30m
      1 stop
      ENI 09:55
      Manila - El Nido | Tue, Nov 17 | Philippines AirAsia
      HK$1,201 HK$4,165
      71% off
      71% off
      HK$4,165 HK$1,201
    • MNL 15:50
      4h 45m
      1 stop
      ENI 20:35
      Manila - El Nido | Fri, Nov 13 | Cebu Pacific
      HK$1,258
      70% off
      HK$4,165 HK$1,258
    • MNL 13:00
      4h 20m
      1 stop
      ENI 17:20
      Manila - El Nido | Thu, Nov 12 | Philippine Airlines
      HK$1,275
      69% off
      HK$4,165 HK$1,275
    • MNL 15:50
      4h 45m
      1 stop
      ENI 20:35
      Manila - El Nido | Fri, Nov 20 | Cebu Pacific
      HK$1,307
      69% off
      HK$4,165 HK$1,307
    • MNL 13:30
      3h 50m
      1 stop
      ENI 17:20
      Manila - El Nido | Sat, Nov 7 | Cebu Pacific
      HK$1,308
      69% off
      HK$4,165 HK$1,308
    • MNL 04:50
      5h 5m
      1 stop
      ENI 09:55
      Manila - El Nido | Thu, Nov 5 | Cebu Pacific
      HK$1,551
      63% off
      HK$4,165 HK$1,551
    • MNL 13:30
      3h 50m
      1 stop
      ENI 17:20
      Manila - El Nido | Sat, Nov 28 | Cebu Pacific
      HK$1,837
      56% off
      HK$4,165 HK$1,837
    • MNL 13:00
      17h 25m
      1 stop
      ENI 14:00
      Manila - El Nido | Thu, Nov 5 | Normal Airline
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    • MNL 03:45
      4h 50m
      1 stop
      ENI 08:35
      Manila - El Nido | Sun, Nov 8 | Cebu Pacific
      HK$1,300 HK$3,478
      63% off
      63% off
      HK$3,478 HK$1,300
    • MNL 13:30
      3h 50m
      1 stop
      ENI 17:20
      Manila - El Nido | Sat, Nov 7 | Cebu Pacific
      HK$1,308 HK$3,478
      62% off
      62% off
      HK$3,478 HK$1,308
    • MNL 04:50
      5h 5m
      1 stop
      ENI 09:55
      Manila - El Nido | Thu, Nov 5 | Cebu Pacific
      HK$1,551 HK$3,478
      55% off
      55% off
      HK$3,478 HK$1,551
    • MNL 00:00
      6h
      1 stop
      ENI 06:00
      Manila - El Nido | Wed, Nov 11 | Cebu Pacific
      HK$1,576
      55% off
      HK$3,478 HK$1,576
    • MNL 12:10
      4h 30m
      1 stop
      ENI 16:40
      Manila - El Nido | Fri, Nov 6 | Cebu Pacific
      HK$1,702
      51% off
      HK$3,478 HK$1,702
    • MNL 06:05
      4h 20m
      1 stop
      ENI 10:25
      Manila - El Nido | Mon, Nov 9 | Cebu Pacific
      HK$2,127
      39% off
      HK$3,478 HK$2,127
    • MNL 12:10
      4h 30m
      1 stop
      ENI 16:40
      Manila - El Nido | Wed, Nov 4 | Cebu Pacific
      HK$2,469
      28% off
      HK$3,478 HK$2,469
    • MNL 13:00
      17h 25m
      1 stop
      ENI 14:00
      Manila - El Nido | Thu, Nov 5 | Normal Airline
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    • MNL 13:00
      4h 20m
      1 stop
      ENI 17:20
      Manila - El Nido | Thu, Dec 3 | Philippine Airlines
      HK$1,643 HK$4,448
      63% off
      63% off
      HK$4,448 HK$1,643
    • MNL 13:00
      4h 20m
      1 stop
      ENI 17:20
      Manila - El Nido | Thu, Nov 5 | Philippine Airlines
      HK$1,653 HK$4,448
      63% off
      63% off
      HK$4,448 HK$1,653
    • MNL 13:00
      4h 20m
      1 stop
      ENI 17:20
      Manila - El Nido | Thu, Dec 17 | Philippine Airlines
      HK$2,001 HK$4,448
      55% off
      55% off
      HK$4,448 HK$2,001
    • MNL 13:00
      4h 20m
      1 stop
      ENI 17:20
      Manila - El Nido | Thu, Dec 24 | Philippine Airlines
      HK$2,127
      52% off
      HK$4,448 HK$2,127
    • MNL 13:00
      4h 20m
      1 stop
      ENI 17:20
      Manila - El Nido | Thu, Nov 26 | Philippine Airlines
      HK$2,241
      50% off
      HK$4,448 HK$2,241
    • MNL 11:40
      5h
      1 stop
      ENI 16:40
      Manila - El Nido | Fri, Nov 6 | Philippine Airlines
      HK$1,920
      56% off
      HK$4,448 HK$1,920
    • MNL 11:40
      5h
      1 stop
      ENI 16:40
      Manila - El Nido | Thu, Nov 12 | Philippine Airlines
      HK$2,215
      50% off
      HK$4,448 HK$2,215
    • MNL 11:40
      5h
      1 stop
      ENI 16:40
      Manila - El Nido | Sat, Nov 28 | Philippine Airlines
      HK$2,316
      48% off
      HK$4,448 HK$2,316
    • MNL 11:40
      5h
      1 stop
      ENI 16:40
      Manila - El Nido | Fri, Nov 27 | Philippine Airlines
      HK$2,330
      48% off
      HK$4,448 HK$2,330
    • MNL 13:00
      17h 25m
      1 stop
      ENI 14:00
      Manila - El Nido | Thu, Nov 5 | Normal Airline
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Displayed flight fares from Manila to El Nido are based on average prices across airlines for the next 3 months, according to the latest Trip.com database.

Trip.com Price Insights: Flights from Ninoy Aquino International Airport to El Nido Airport

What is the cheapest month to fly from Ninoy Aquino International Airport to El Nido Airport?

The data is based on the past 12 months and shows the average one-way ticket prices from Ninoy Aquino International Airport to El Nido Airport for each month in the Trip.com database.

Based on Trip.com's data from the past 12 months, the cheapest one-way flights from Ninoy Aquino International Airport to El Nido Airport are usually in January, with an average price of HK$1,126. It is best to avoid August, when the average price can reach HK$1,677.

HK$1,677
HK$1,402
HK$1,126
HK$851
    Cheapest
  • HK$1,302
    Nov
  • HK$1,355
    Dec
  • HK$1,126
    Jan
  • HK$1,312
    Feb
  • HK$1,238
    Mar
  • HK$1,364
    Apr
  • HK$1,561
    May
  • HK$1,665
    Jun
  • HK$1,571
    Jul
  • HK$1,677
    Aug
  • HK$1,419
    Sep
  • HK$1,388
    Oct

What is the cheapest month to fly return from Ninoy Aquino International Airport to El Nido Airport?

The data is based on the past 12 months and shows the average monthly return fares from Ninoy Aquino International Airport to El Nido Airport in the Trip.com database.

Based on Trip.com's data from the past 12 months, April is often the month to find the lowest fares from Ninoy Aquino International Airport to El Nido Airport, with an average price of HK$1,808. July is usually the most expensive month, with an average price reaching HK$3,962.

HK$3,962
HK$2,885
HK$1,808
HK$731
    Cheapest
  • HK$2,581
    Nov
  • HK$2,765
    Dec
  • HK$2,290
    Jan
  • HK$2,638
    Feb
  • HK$2,704
    Mar
  • HK$1,808
    Apr
  • HK$2,168
    May
  • HK$3,134
    Jun
  • HK$3,962
    Jul
  • HK$3,287
    Aug
  • HK$2,104
    Sep
  • HK$3,697
    Oct

What is the cheapest day of the week to fly from Ninoy Aquino International Airport to El Nido Airport?

The data is based on the past 12 months and shows the average ticket prices from Ninoy Aquino International Airport to El Nido Airport for each day of the week in the Trip.com database.

Based on Trip.com's data from the past 12 months, the cheapest departure day from Ninoy Aquino International Airport to El Nido Airport is Thursday, with average prices usually lower than other days. Avoid departing on Saturday as prices are typically highest on that day.

HK$1,446
HK$1,405
HK$1,364
HK$1,323
    Cheapest
  • HK$1,424
    Mon
  • HK$1,434
    Tue
  • HK$1,423
    Wed
  • HK$1,364
    Thu
  • HK$1,377
    Fri
  • HK$1,446
    Sat
  • HK$1,387
    Sun

Which airline offers the cheapest flights from Ninoy Aquino International Airport to El Nido Airport?

The cheapest airline flying from Ninoy Aquino International Airport to El Nido Airport is Cebu Pacific (from HK$986) among 3 carriers operating this route. Based on Trip.com's latest 7-day flight data.

Cebu Pacific
From HK$986
Philippines AirAsia
From HK$1,002
Philippine Airlines
From HK$1,053

Find more flights and airlines

What is the flight schedule from Ninoy Aquino International Airport to El Nido Airport?

Check the schedule for flights from Manila to El Nido and find the flight that best matches your travel plans.

Flight info.
Departure
Arrival
Weekly Schedule

  1. 5J553

    Ninoy Aquino International Airport

    00:00

    MNL

    1h 30m

    Direct

    01:30

    CEB

    S M T - T - -
    Search

  2. DG6256

    Mactan-Cebu International Airport

    04:10

    CEB

    1h 50m

    Direct

    06:00

    ENI

    S M T W T F S

  3. 5J575

    Ninoy Aquino International Airport

    23:40

    MNL

    1h 35m

    Direct

    01:15

    CEB

    - - - - T F S
    Search

  4. DG6256

    Mactan-Cebu International Airport

    04:10

    CEB

    1h 50m

    Direct

    06:00

    ENI

    S M T W T F S

  5. 5J905

    Ninoy Aquino International Airport

    14:20

    MNL

    1h 15m

    Direct

    15:35

    MPH

    S M T W T F S
    Search

  6. DG6707

    Godofredo P. Ramos Airport

    20:05

    MPH

    1h 10m

    Direct

    21:15

    ENI

    - M - W - F -

  7. 5J583

    Ninoy Aquino International Airport

    23:15

    MNL

    1h 35m

    Direct

    00:50

    CEB

    S M T W T - S
    Search

  8. DG6256

    Mactan-Cebu International Airport

    04:10

    CEB

    1h 50m

    Direct

    06:00

    ENI

    S M T W T F S

  9. PR2869

    Ninoy Aquino International Airport

    23:40

    MNL

    1h 20m

    Direct

    01:00

    CEB

    S M T W T F S
    Search

  10. DG6256

    Mactan-Cebu International Airport

    04:10

    CEB

    1h 50m

    Direct

    06:00

    ENI

    S M T W T F S

  11. 5J2503

    Ninoy Aquino International Airport

    20:45

    MNL

    1h 35m

    Direct

    22:20

    CEB

    S M T W T F S
    Search

  12. DG6256

    Mactan-Cebu International Airport

    04:10

    CEB

    1h 50m

    Direct

    06:00

    ENI

    S M T W T F S

  13. 5J2509

    Ninoy Aquino International Airport

    22:45

    MNL

    1h 35m

    Direct

    00:20

    CEB

    S - - - - - -
    Search

  14. DG6256

    Mactan-Cebu International Airport

    04:10

    CEB

    1h 50m

    Direct

    06:00

    ENI

    S M T W T F S

  15. Z28777

    Ninoy Aquino International Airport

    22:30

    MNL

    1h 30m

    Direct

    00:00

    CEB

    S - T - T - S
    Search

  16. DG6256

    Mactan-Cebu International Airport

    04:10

    CEB

    1h 50m

    Direct

    06:00

    ENI

    S M T W T F S

  17. 5J2501

    Ninoy Aquino International Airport

    20:35

    MNL

    1h 35m

    Direct

    22:10

    CEB

    - - T - - F -
    Search

  18. DG6256

    Mactan-Cebu International Airport

    04:10

    CEB

    1h 50m

    Direct

    06:00

    ENI

    S M T W T F S

  19. Z2777

    Ninoy Aquino International Airport

    17:45

    MNL

    1h 25m

    Direct

    19:10

    CEB

    - M - W - F -
    Search

  20. DG6256

    Mactan-Cebu International Airport

    04:10

    CEB

    1h 50m

    Direct

    06:00

    ENI

    S M T W T F S
Find more flights and airlines

About Ninoy Aquino International Airport and El Nido Airport

Learn about Ninoy Aquino International Airport (MNL) and El Nido Airport (ENI) — including location, terminals, transportation, and travel tips.

Flight distance 407.32km
Cheapest one-way ticket price HK$986
Cheapest return ticket price HK$1,906

FAQs for Ninoy Aquino International Airport to El Nido Airport Flights

  • How many daily flights are there from Ninoy Aquino International Airport (MNL) to El Nido Airport (ENI)?

    There are around 2 daily flights from Ninoy Aquino International Airport (MNL) to El Nido Airport (ENI).
  • The route from Ninoy Aquino International Airport (MNL) to El Nido Airport (ENI) is quite popular. Without considering departure times or holidays, tickets cost around HK$1,942 in March, the most expensive month to book this route.
    • The distance from El Nido Airport to downtown is about 5km, by taxi about 20 minutes.
  • AirSWIFT AirLine is a very popular airline operating an average of 6624 flights per month.
  • One-way flights from Ninoy Aquino International Airport to El Nido Airport currently start from HK$986, and round-trip fares start from HK$1,906. The current lowest fare is a Cebu Pacific flight departing on Fri, Nov 20; prices may vary depending on availability.
  • Based on Trip.com flight data for departures within the next 30 days with at most one stop, the average one-way price from Ninoy Aquino International Airport to El Nido Airport is HK$1,421. Prices may vary depending on the departure date, airline, and availability.
  • AirSWIFT AirLine are the most popular budget airlines flying from Ninoy Aquino International Airport to El Nido Airport, with one-way fares starting from HK$986. Compare final prices carefully, as baggage, seat selection and payment fees may apply.
  • Enter Ninoy Aquino International Airport and El Nido Airport, select your departure date and number of passengers, then compare flights by price, flight duration, and baggage allowance. Once you've chosen a fare, review the change and refund rules, fill in passenger details, and pay to receive your booking confirmation.

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